LncVar
lncRNA
Human
Mouse
Zebrafish
Fruitfly
Worm
Arabidopsis
Rat
Chicken
Cow
SNPs
Human
Mouse
Zebrafish
Fruitfly
Worm
Arabidopsis
CNVs
Fusions
Search
Download
Genome
Help
About
Human-Fusions :
Fusion genes are usually oncogenes, and play important roles in tumorgenesis.
Several computional methods have been developed to discover fused transcripts from RNA-seq data. We downloaded RNA-seq data of 7 cell lines from ENCODE project, and prediced lncRNA genes involved fusion events using deFuse and FusionMap. We integrated the predicted results into LncVar.
Mechanism of lncRNA genes involved fusion events:
Fusion ID
Gene1
Gene2
Chr1
Chr2
Gene1 type
Gene2 type
PositionToStart left
PositionToStart right
Fusion length
Cell line
DeFuse
FusionMap
Fusion ID
Gene1
Gene2
Chr1
Chr2
Gene1 type
Gene2 type
PositionToStart left
PositionToStart right
Fusion length
Cell line
DeFuse
FusionMap